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Bioinformatics Resource Centers (BRCs)

Overview

Background

Over the past few years, NIAID has launched a number of initiatives to provide comprehensive genomics resources to the scientific community conducting basic and applied research on organisms considered agents of bioterrorism or causing emerging or re-emerging diseases. The availability of genome sequences of pathogens, pathogen vectors, and their disease hosts has opened up new research opportunities and will allow scientists to systematically examine biological systems, such as those involving host immune response to pathogen infection or to vaccination. There is a growing need for integrating genomics, proteomics, and biochemical and microbiological information to facilitate the interpretation of the data and generate new scientific hypotheses, and ultimately new targets, for diagnostics, drugs, or vaccines.

Centers

The NIAID Bioinformatics Resource Centers (BRCs) will focus on data related to multiple organisms selected from the NIAID lists of Category A, B, and C priority pathogens and other pathogens causing emerging and re-emerging diseases.

Each Center maintains data related to a selection of pathogens. Relational databases will be established to collect a variety of data types, such as genome sequencing, comparative genomics, genome polymorphisms, gene expression, proteomics, and host/pathogen interactions and pathways.

Access to these data and their interpretation will be facilitated by user-friendly Web interfaces and state-of-the-art analysis tools. In addition, training opportunities will be offered to the scientific community on the use and interpretation of the data contained in the database and the analysis tools available.

The BRCs are supported by multidisciplinary teams consisting of pathogen domain experts, microbiologists, bioinformaticians, and computer scientists.

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Highlights

Release of preliminary 0.5 gene annotation of Ixodes scapularis (ABJB010000000), April 29, 2008

PFGRC Announces the Addition of an Influenza Gateway® Entry Clone Set (non-gov't link)

NIH Human Microbiome Project

Culex pipiens quinquefasciatus annotation coming soon. Assembly information here

DNA Microarrays Available Now!

See Also

NIAID Pathogen Genomics Research

Microbial Genome Sequencing Centers

Pathogen Functional Genomics Resource Center

Proteomics Research Centers

Structural Genomics Centers

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Highlights

Release of preliminary 0.5 gene annotation of Ixodes scapularis (ABJB010000000), April 29, 2008

PFGRC Announces the Addition of an Influenza Gateway® Entry Clone Set (non-gov't link)

NIH Human Microbiome Project

Culex pipiens quinquefasciatus annotation coming soon. Assembly information here

DNA Microarrays Available Now!

See Also

NIAID Pathogen Genomics Research

Microbial Genome Sequencing Centers

Pathogen Functional Genomics Resource Center

Proteomics Research Centers

Structural Genomics Centers